http://jswails.wikidot.com/installing-amber12-and-ambertools-12#toc0

1、依照原文指导，修改bugfix路径

If patch_amber.py CANNOT access the internet

To work around a firewall, you will have to set up a mirror of the bugfix website in a site that you can access (it can even just be a folder on the same machine). You will need to edit patch_amber.py to change the location of the bugfix repository to point to the location of your mirror.

The lines you need to change look like

If there is another website reachable via the http protocol, you can just change the sites above to the new ones containing the bugfix.# files. If you wish to re-direct to a local folder, you will need to change those lines to something like:

You must download all of the bugfix files and place them in /path/to/mirror/folder/ on your local machine.

2、安装

放弃，./configure gnu，发现编译过不去

采用

./configure -noX11 intel

make install

并行

./configure -noX11 -mpi intel

直接make install会出错。打开config.h,把里面所有的mpif90都改成mpiifort，所有的mpicc都改成mpiicc，保存。然后再make install

(引自http://blog.csdn.net/rogerzhanglijie/article/details/8474463)

export DO_PARALLEL="mpirun -np 2"
make test