http://scikit-bio.org : scikit-bio is an open-source, BSD-licensed, python package providing data structures, algorithms, and educational resources for bioinformatics.
文章: Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer 2015 ( http://www.ncbi.nlm.nih.gov/pubmed/26408641 )
文章: A survey of best practices for RNA-seq data analysis 2016 ( http://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0881-8 ) 文章:A comparison of methods for differential expression analysis of RNA-seq data 2013 ( https://bmcbioinformatics.bi ...
文章: EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data 2016 ( https://www.ncbi.nlm.nih.gov/pubmed/26582919 ) 文章: HPMCD: the database of human microbial communities from metagenomic datasets and microbial r ...
文章: Partial Least Squares Regression Can Aid in Detecting Differential Abundance of Multiple Features in Sets of Metagenomic Samples 2015 ( http://www.ncbi.nlm.nih.gov/pubmed/26734061 ) 文章: A robust approach for identifying differentially abundant features i ...
文章: EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation 2016 ( http://www.ncbi.nlm.nih.gov/pubmed/26896844 ) 文章: Network construction and structure detection with metagenomic count data 2015 ( ...
文章:GenSeed-HMM: A Tool for Progressive Assembly Using Profile HMMs as Seeds and its Application in Alpavirinae Viral Discovery from Metagenomic Data (2016.03) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4777721/ 文章: TruSPAdes: barcode assembly of TruSeq synthetic long ...