RAPID is a radiosity-based remote sensing simulator in optical range for directionalreflectance, temperature and lidar signals of vegetation-involved 3D scenes. RAPID is based on previous studies of RGM (Qin and Gerstl, 2000) and TRGM (Liu etal., 2007). Previous version can be downloaded from https://www.dropbox.com/sh/8kbjt2uel789zwa/y2Gu0qFHhU/RAPID . The setup program of RAPID is listed: RAPID v1.0: RAPID.msi . RAPID video: RAPID video and help documents RAPID v1.1: RAPID.msi Reference Huaguo Huang, Wenhan Qin, Qinhuo Liu,2013, RAPID: A Radiosity Applicable to Porous IndiviDual Objects fordirectional reflectance over complex vegetated scenes, Remote Sensing ofEnvironment, Volume 132(5): 221-237 (SCI,IF = 5.103)
Makefile Makeinclude.Linux2_x86 Before you want to install ioapi , especially you want to couple the ioapi, you should install PVM3 http://www.netlib.org/pvm3/ 1 install pvm3 (1)tar -zxvf pvm*.tar.gz (2) cd pvm3 (3)csh //use c-shell (4) setenv PVM_ROOT /home/wangxun/Dowloads/pvm3 // where the source of the pvm3 (5) make (6) setenv PVM_ARCH LINUX (7) setenv BIN Linux2_x86 2 install ioapi (1) Download the code from http://www.baronams.com/products/ioapi/AVAIL.html#v31 (2) mkdir /home/wangxun/ioapi (3) cd /home/wangxun/ioapi (4) mkdir lib (5) mkdir bin (6) cd /home/wangxun/Dowloads (7) mkdir ioapi (8) cp ioapi*.tar.gz ioapi (10) cd ioapi (11) tar -zxvf ioapi*.tar.gz (12) vim Makefile as foolowing: (also can see the attachment of my Makefile) BASEDIR = /home/wangxun/Downloads/ioapi // the source of ioapi INSTALL = /home/wangxun/ioapi // where you want to install LIBINST = $(INSTALL)/lib // where you install the ioapi's lib BININST = $(INSTALL)/bin // where you install the ioapi's bin CPLMODE = cpl // 'cpl' means you want to couple the ioapi , you should install PVM3 fisrt // and indicate the PATH of PVM3 IOAPIDEFS = -DIOAPICPL PVMINCL = $(PVM_ROOT)/conf/$(PVM_ARCH).def //the path of PVM (13) cd ioapi (14) vim Makeinclude.Linux2_x86 (15) replace the "MFLAGS = -m486 -malign-double \" with "MFLAGS = -mtune=i686 -malign-double \" (16) replace " PVM_ARCH= LINUXI386" with "PVM_ARCH=LINUX" (16) make configure (17) make (18) make install (19) you will get Linux2_x86 file which contains library and binrary
Home Register Mailing Lists Documentation Home Getting HTK Register Manage login/password Download Documentation HTKBook FAQ History of HTK CUED LVR Systems License Mailing Lists Subscribe Account/Unsubscribe Archives Development Get involved Future Plans Report a Bug Bug Status !-- Betaversion BR -- ATK Links HTK Extensions ASR Toolkits/Software ASR Research Sites Speech Companies Speech Conferences Speech Journals ASR Evaluations Search Sponsors Download HTK HTK can be downloaded either via HTTP or FTP. In either case you need to register and agree to the license to receive a username and password which allows you to download HTK. HTK is available as a source distribution. To build HTK3 you must have a working ANSI C compiler and associated tools installed on your system. Ask your Systems Administrator if you are unsure whether you have these tools. Documentation for the individual tools that make up HTK can be found in the HTKBook . Registered users may download the most recent version of HTK and the HTK Samples using the following links: Linux/Unix downloads HTK source code (tar+gzip archive) HTK samples (tar+gzip archive) Windows downloads HTK source code (zip archive for Windows users) !-- HTK windows binary release (zip archive) -- HTK samples (zip archive for Windows users) HTK Book PDF (gzip) PDF (zip) Postscript (gzip) Postscript (zip) Browse HTK software archive HTK software (all versions) Using FTPUse your FTP client to log into htk.eng.cam.ac.uk using the username and password given to you. From here you can download snapshots of current HTK releases. A typical command line FTP session to download the current HTK release would appear as below (with typed instructions in bold ): ftp htk.eng.cam.ac.uk Connected to htk.eng.cam.ac.uk. 220 htk FTP server ready. Name (htk.eng.cam.ac.uk:test): username 331 Password required for username . Password: password 230 User username logged in. Remote system type is UNIX. Using binary mode to transfer files. ftp cd software 250 CWD command successful. ftp binary 200 Type set to I. ftp get HTK-3.4.1.tar.gz ftp get HTK-samples-3.4.1.tar.gz Comments and suggestions to htk-mgr@eng.cam.ac.uk
金龙推荐的康涅狄格大学Holsinger教授的种群遗传学笔记，很好的资源，保存备用。 http://blog.sciencenet.cn/home.php?mod=spaceuid=255662 http://darwin.eeb.uconn.edu/eeb348/lecturenotes/notes.html Notes If you'd like to print a copy of any of these notes, I suggest printing the PDF version, which you can download by clicking on the icon. The "Lecture notes in population genetics" link is to a PDF compilation of all of these notes, including a table of contents and an index. I suggest waiting until the end of the semester to download this PDF, because it's contents will be revised as I revise and update then notes listed below. You should also be aware that my automated HTML conversion from LaTeX sometimes doesn't work quite right. Figures may be missing, and symbols may end up in the wrong place. If something doesn't look right, take a look at the PDF to see if it's simply a problem with the HTML rendering. If it still doesn't look right, it's entirely possible that there's an error. If you find one, please let me know. You will also find links to the notes associated with a particular lecture on the detail page associated with that lecture. Lecture notes in population genetics The genetic structure of populations Genetic transmission in populations The Hardy-Weinberg principle and estimating allele frequencies in populations Inbreeding and self-fertilization Testing for departures from Hardy-Weinberg proportions The Wahlund Effect and Wright's F-statistics Analyzing the genetic structure of populations: Nei's Gst, Weir Cockerham's Supplementary notes on GDA The genetic structure of populations: Bayesian F-statistics The genetic structure of populations: individual assignment Two-locus population genetics The genetics of natural selection The genetics of natual selection Estimating viability Selection at one locus with many alleles, fertility selection, and sexual selection Selection components analysis Genetic drift Genetic drift Mutation, migration, and genetic drift Selection and genetic drift The coalescent Quantitative genetics Introduction to quantitative genetics Resemblance among relatives Partitioning variance with WinBUGS Evolution of quantitative traits Simultaneous evolution of several quantitative traits Mapping quantitative trait loci Mapping quantitative trait loci with QTL Cartographer Molecular evolution Introduction to molecular population genetics The neutral theory of molecular evolution Patterns of nucleotide and amino acid substitution Detecting selection on nucleotide polymorphisms Patterns of selection on nucleotide polymorphisms Tajima's D, Fay and Wu's H, and Zeng et al.'s E Evolution in multigene families Phylogeography Analysis of molecular variance (AMOVA) Nested clade analysis Statistical phylogeography Fully coalescent-based approaches to phylogeography Approximate Bayesian computation Links to WinBUGS problems and notes Many of the problem assignments in the course use WinBugs . A few of the lectures deal specifically with the use of WinBugs to solve problems in population genetics. To make it easy to find both sets of notes, I've listed them here. The Hardy-Weinberg principle and estimating allele frequencies in populations (The WinBUGS section starts on p. 8.) Analyzing mother-offspring combinations at microsatellite loci Problem statement Solution Estimating rates of self-fertilization in hermaphroditic plants Problem statement Solution Estimating viability Problem statment Solution Estimating effective population size (Note: the solution provided isn't quite correct. It uses the mean allele in the offspring population instead of the mean in the parental population, and it ignores the sampling variance of within-population allele frequencies.) Problem statement Solution Testing Hardy-Weinberg (The WinBUGS section starts on p. 3) Partitioning variance with WinBUGS Problem statement Solution No TrackBacks TrackBack URL: http://darwin.eeb.uconn.edu/cgi-bin/mt/mt-tb.cgi/380
（1）Download NAMD最新版（source）： http://www.ks.uiuc.edu/Development/Download/download.cgi （2）Download and install TCL and FFTW libraries: (cd to NAMD_2.8b3_Source if you're not already there) 64bit： wget http://www.ks.uiuc.edu/Research/namd/libraries/fftw-linux-x86_64.tar.gz tar xzf fftw-linux-x86_64.tar.gz mv linux-x86_64 fftw 32bit： wget http://www.ks.uiuc.edu/Research/namd/libraries/fftw-linux.tar.gz tar xzf fftw-linux.tar.gz mv linux fftw 64bit： wget http://www.ks.uiuc.edu/Research/namd/libraries/tcl-linux-x86_64.tar.gz tar xzf tcl-linux-x86_64.tar.gz mv linux-x86_64 tcl 32bit： wget http://www.ks.uiuc.edu/Research/namd/libraries/tcl-linux.tar.gz tar xzf tcl-linux.tar.gz mv linux tcl （3）install charm-6.3.2 tar xzf NAMD_2.8_Source.tar.gz cd NAMD_2.8_Source tar xf charm-6.3.2.tar cd charm-6.3.2 64bit：Build and test the Charm++/Converse library (MPI version): env MPICXX=mpicxx ./build charm++ mpi-linux-x86_64 --no-build-shared --with-production cd mpi-linux-x86_64/tests/charm++/megatest make pgm mpirun -n 8 ./pgm (run as any other MPI program on your cluster，8个核) cd ../../../../.. 32bit：Build and test the Charm++/Converse library (MPI version): env MPICXX=mpicxx ./build charm++ mpi-linux --no-build-shared --with-production cd mpi-linux/tests/charm++/megatest make pgm mpirun -n 2 ./pgm (run as any other MPI program on your cluster; 2表示几个核，4个核的话，就是4) cd ../../../../.. 64bit： vi arch/Linux-x86_64.fftw (fix library name and path to fftw files) vi arch/Linux-x86_64.tcl (fix library version and path to TCL files) 32bit： vi arch/Linux-x86.fftw (fix library name and path to fftw files) FFTDIR=/usr/NAMD_2.8_Source/fftw/linux FFTINCL=-I$(FFTDIR)/include FFTLIB=-L$(FFTDIR)/lib -lsrfftw -lsfftw FFTFLAGS=-DNAMD_FFTW FFT=$(FFTINCL) $(FFTFLAGS) vi arch/Linux-x86.tcl (fix library version and path to TCL files) TCLDIR=/usr/NAMD_2.8_Source/tcl/linux TCLINCL=-I$(TCLDIR)/include TCLLIB=-L$(TCLDIR)/lib -ltcl8.3 -ldl TCLFLAGS=-DNAMD_TCL TCL=$(TCLINCL) $(TCLFLAGS) Set up build directory and compile: 64bit: ./config Linux-x86_64-g++ --charm-arch mpi-linux-x86_64 cd Linux-x86_64-g++ make (or gmake -j4, which should run faster) 32bit: ./config Linux-x86-g++ --charm-arch mpi-linux cd Linux-x86-g++ make (or gmake -j4, which should run faster) Quick tests using one and two processes (MPI version): ${MPICH_HOME}/bin/mpirun -machinefile machinefile -np 2 /usr/NAMD_2.8_Source/Linux-x86-g++/namd2 src/alanin
Remote Access with VNC On the Windows computer you will be using from outside the center: • 1. Download putty.exe from here . • 2. Download Ultr@VNC Standalone Viewer . 3. Open Putty and open a connection to Host Name gate.nmr.mgh.harvard.edu 4. From gate ssh to your linux workstation. (In this example user 'mehlsa' is connecting to a workstation named 'crusoe') 5. Once connected to your workstation, run the command /usr/pubsw/bin/vncpasswd . Enter and confirm a password that you will use to connect remotely. 6. Run the command /usr/pubsw/bin/vncserver.glx 7. You must note the number value that is returned for your remote desktop. In this example the value is 1 . You do not normally need to run steps 5-7 every time you connect. Unless your workstation has rebooted or you have explicitly killed your VNC server process, the vncserver.glx program will still be running. After connecting to your workstation run /usr/pubsw/bin/vnccheck to see see if the process is still running. This will also show you the desktop number (the number after the colon) you need for the tunnel. • 8. Open a new putty window. • 9. Enter gate.nmr.mgh.harvard.edu for the Host Name and enter gate_vnc for the Saved Sessions. • 10. In the category menu on the left, click on "Tunnels" • 11. Enter a Source port of 5905 . • 12. For the Destination, you should enter the name of the linux workstation that is running vncserver.glx followed by a colon and 590X where "X" is the number you noted in step #7 above. . (In this example, we are attempting to create a tunnel to the destination crusoe:5901 ). • 13. You must click the 'Add' button. • 14. In the category menu on the left, click on "Session" • 15. Click the 'Save' button to save all the changes you've made. • 16. Now double-click on ' gate_vnc ' to open a terminal window. • 17. Login using your NMR username and password. Once you have logged in, you can minimize the window. As long as the window remains open, the tunnel will exist and you will be able to use VNC. • 18. Open. UltraVNC Viewer. • 19. You must enter localhost:5905 as the Server. Then press Connect. • 20. Use the password you set in step #5 to connect. • 21. Once connected, you can click on the icon in the upper-left hand corner of the screen to display a menu with some commonly uses commands.
New MRT Release The Land Processes Distributed Active Archive Center (LP DAAC) announces the release of a new version of the MODIS Reprojection Tool (MRT) application. MRT v4.1 incorporates bug fixes and resolution of issues identified by users since the last release in 2008. Please see the Release Notes for details. Download, installation, and execution assistance is available from LP DAAC User Services. https://lpdaac.usgs.gov/lpdaac/tools/modis_reprojection_tool NASA Land Processes Distributed Active Archive Center User Services USGS Earth Resources Observation and Science (EROS) 47914 252nd Street Sioux Falls, SD 57198-0001 Voice: 605-594-6116 Toll Free: 866-573-3222 Fax: 605-594-6963 E-mail: LPDAAC@usgs.gov Web: https://LPDAAC.usgs.gov
各位博友，大家好！ 今日在网上查到一篇文献，与本人目前的研究工作非常接近，但是遗憾的是无法从网上download该文献的pdf全文，有哪位博友有该文全文或有什么办法下载全文，烦请发给我（ guomx@whu.edu.cn ）或告之，不甚感激！ 信息如下： Ma Y, Zhang P, Wang F, Yang J, Yang Z,Qin H. The relationship between early embryo development and tumourigenesis. J Cell Mol Med 2010 14: 2697-701. http://onlinelibrary.wiley.com/doi/10.1111/j.1582-4934.2010.01191.x/full
Ebook: Mathematical Modeling of Industrial Transport Processes Edited by Peng Xu, Zhonghua Wu and Arun S. Mujumdar Transport Processes Research (TPR) Group National University of Singapore ISBN: 978-981-08-6269-5 Please visit Prof. Mujumdar's Website for free download.
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