发育生物学领域的大牛和研究机构总结 1. Eric H. Davidson, 1937, California Institute of Technology http://www.its.caltech.edu/~davidson/ 2. Michael Levine, 1954, University of California, Berkeley http://flydev.berkeley.edu/cgi-bin/labpage/Levine_Lab 3. Sean B. Carroll, 1960 , University of Wisconsin–Madison http://seanbcarroll.com/ 4. Alexander Stark, Research Institute of Molecular Pathology (IMP), Vienna, Austria http://www.starklab.org 5.
基因组观测点是生物多样性方面新的热点之一。该思路经过前期的酝酿与发起，现在已经进入完善与推动阶段。相关信息转载于Genomic Observatories的网站（ http://genomicobservatories.blogspot.com/ ）。 What is a Genomic Observatory? A Genomic Observatory(GO) is a geographic site with a rich history of environmental/ecologicaldata collection and a long-term commitment to future studies. GOs are leading sites where biodiversity is digitized into its most fundamental layer forstreaming to global repositories (INSDC, GBIF, etc.) and major analytical centers (museums, government research laboratories, universities, and international organizations). Genomic ObservatoriesVision: Our goal is to help preserve Earth's life supportsystems and promote sustainable development through a better understanding ofthe human-environment interaction. Our approach is to apply cutting-edge genomic technologies to observe the flux of genetic variation -- the Earth'sbiocode -- across human and natural ecosystems. We link these genetic data to biophysical and socioeconomic data and integrate the resultinginformation in predictive models. These models aim to map the quality anddistribution of biodiversity and the ecosystem services it provides under various scenarios of future change and human activity. Mission Statement Ø To build a global network of premier research sites working to generate genomic biodiversity observations that are well contextualized and compliant with global data standards. Ø To encourage a set of long-term, place-based, DNA-centric programs that quantify biotic interactions in an ecosystem and develop modelsof biodiversity to predict the quality and distribution of ecosystem services. Ø To provide training, technical assistance, resources, andbest practice guides as a learning platform for sites and organizations wishingto carry out genomic observations, particularly new sites in developing countries (many of which have very high and/or vulnerable biodiversity) Contact: Neil Davies: ndavies@moorea.berkeley.edu Dawn Field: dfield@ceh.ac.uk Papers: Ø Sequencing data: A genomic network to monitor Earth. Nature 481,145 (12 January 2012) doi:10.1038/481145a (http://www.nature.com/nature/journal/v481/n7380/full/481145a.html). Ø A call for an international network of genomicobservatories (GOs) . Neil Davies, Chris Meyer, Jack AGilbert, Linda Amaral-Zettler, John Deck, Mesude Bicak, Philippe Rocca-Serra,Susanna Assunta-Sansone, Kathy Willis, Dawn Field. GigaScience 2012, 1 :5 (12 July 2012) doi:10.1186/2047-217X-1-5 Neil Davies et al. The founding charter of the Genomic Observatories Network. GigaScience 2014, 3 :2(7 March 2014) doi:10.1186/2047-217X-3-2. Meetings: Ø 4th Genomic Observatories meeting -will be held in associationwith GSC16 at Oxford University, March 30th -April 1st, 2014. Ø GOs Session: How does Genomic Biodiversity contributeto Ecological Resilience? at Biodiversity Resilience Symposium , University of Oxford, UK. 2-3 October, 2013 Ø 3rd Genomic Observatories meeting ( GOs3 ) hosted at the Natural HistoryMuseum, London, UK. June 3-4, 2013 Ø 2nd Genomic Observatories meeting ( GOs2 ) hosted at the Smithsonian Institution, Washington, DC. April 25-26, 2013 Ø GOs Session: Humans as Genomic Observatories andCitizen Science Genomics at GSC 15 at NIH, Bethesda, MD. April 24, 2013 Ø Capturing Genomes Workshop with Global Genome Initiative at Smithsonian Institution, WashingtonDC. April 18-19, 2013 Ø Genomic Observatories, Ocean Sampling Day, and Marine GEO at National Association of Marine Labs (NAML)winter meeting ,Washington DC, 7-9 March, 2013 Ø Genomic Observatories at GEO BON All Hands Meeting 3-6 December 2012, Asilomar ConferenceGrounds, Pacific Grove, California Ø Developing WAML as an Observatory Network: GenomicObservatories at Western Association of Marine Labs (WAML), SCCRWPCalifornia, 13-14 Oct, 2012 Ø GOs Session: Genomic Biodiversity ObservingSystems at Biodiversity Technologies Symposium , University of Oxford, UK. 27-28 September, 2012 Ø 1st Genomic Observatories Network meeting ( GOs1 ) co-located with Genomic StandardsConsortium's 14th Workshop ( GSC14 ) Universityof Oxford, UK. September 17-19, 2012 Ø Moorea Genomic Observatory workshop at Gump Station, Moorea, FrenchPolynesia, June 1-5, 2012 Ø GOs Session at GSC 13 - 2012 at BGI, Shenzhen, China, March 4-7, 2012 Ø GOs Session at TDWG - 2011 NewOrleans, October 23, 2011 Ø GSC12Presentation of Minimum information about a Genomic Observatory ,Bremen, Germany, September 28-30, 2011 Ø iEVOBIO2011 special session on metagenomics,barcoding, and biodiversity - development of GOs concept (MIGO) at Norman,Oklahoma, June 22-23, 2011 Ø GSC11 discussion of place based research and first GSC-Biocode exchanges at GenomicBiodiversity Working Group (GBWG) session, Cambridge, UK, March,2011
网络科学(复杂网络)领域的大牛和研究机构总结 （第4次修改） 还原论作为一种范式已经寿终正寝，而复杂性作为一个领域也已疲惫不堪。基于数据的复杂系统的数学模型正以一种全新的视角快速发展成为一个新科学：网络科学。 ( Albert-László Barabási , The network takeover, Nature Physics, Volume:8, Pages:14–16, Year published: 2012; 《网络科学导论》，汪小帆、李翔、陈关荣，2012年 ) 1. Albert - László Barabási , Northeastern University's Center for Complex Network Research (CCNR) . The Center of Cancer Systems Biology (CCSB) at the Dana Farber Cancer Institute, Harvard University. 此人不是一般的NB， 在这个领域属于Top3水平的。 http://www.barabasi.com/ 2. Santa Fe Institute , 专门研究各种复杂适应网络、 复杂适应系统的研究所。 这个领域最著名的研究机构。 http://www.santafe.edu/ 3. Chen Guanrong , the City University of Hong Kong http://www.ee.cityu.edu.hk/~gchen/ 其个人网站上有很多学习网络科学的资源，还列出了每年出版的相关书籍。 4. Réka Albert , Pennsylvania State University http://www.phys.psu.edu/~ralbert/ 和其导师 Barabási一起发现了复杂网络的无标度性质。 5. Jon Kleinberg , Cornell University http://www.cs.cornell.edu/home/kleinber/ 6. Mark Newman , University of Michigan, Santa Fe Institute http://www-personal.umich.edu/~mejn/ 7. Steven Strogatz , Cornell University http://www.mae.cornell.edu/people/profile.cfm?NetID=shs7 8. Duncan J. Watts , Microsoft Research http://research.microsoft.com/en-us/people/duncan/ 和其导师 Steven Strogatz一起发现了复杂网络的小世界特性。 9. Alessandro Vespignani ， Northeastern University http://cnets.indiana.edu/people/alessandro-vespignani 10. Harry Eugene Stanle y , Boston University http://polymer.bu.edu/hes/ 11. James H. Fowler ， University of California, San Diego UCSD的一个研究社会网络的教授。 http://jhfowler.ucsd.edu/ 12. Nicholas A. Christakis , Yale University http://www.nicholaschristakis.net/ 13. José Fernando Mendes , University of Aveiro http://sweet.ua.pt/jfmendes/ 14. Guido Caldarelli , IMT Institute for Advanced Studies Lucca http://www.guidocaldarelli.com/ 15. Shlomo Havlin , Bar-Ilan University http://havlin.biu.ac.il/ 16. Béla Bollobás , University of Memphis http://www.msci.memphis.edu/faculty/bollobas.html 17. Adilson E. Motter , Northwestern University （USA） http://dyn.phys.northwestern.edu/ 18. Dirk Brockmann , Northwestern University （USA） http://rocs.northwestern.edu/
定量生物学领域的大牛和研究机构总结 （第5次修改） 新生物学时代 ( A New Biology for the 21st Century ) 主要表现为生命科学内部各个分支学科的交叉，以及生命科学和数学、物理学、化学、计算机科学、信息科学、数据科学、复杂系统科学以及工程技术等各个学科的交叉。 从定性走向定量！ 定量生物学包括生物数学、生物物理、生物信息学、计算生物学、系统生物学、合成生物学、计算神经科学、理论生态学、计算生态学、免疫信息学、信息生态学等BIO-X学科，在21世纪必定会得到大发展。 本人主要关注 bioinformatics, systems biology and synthetic biology： 1. Uri Alon , Weizmann Institute of Science http://www.weizmann.ac.il/mcb/UriAlon/ 2. Trey Ideker , University of California, San Diego (UCSD) http://idekerlab.ucsd.edu/Pages/default.aspx 3. Leroy Hood , Institute for Systems Biology (Seattle, WA, USA). https://www.systemsbiology.org/hood-group 4. Hiroaki Kitano ， the Systems Biology Institute (SBI) http://www.sbi.jp/members.htm 5. Chao Tang(汤超) , University of California, San Francisco (UCSF) Peking University (PKU), Center for Quantitative Biology (CQB) Tsinghua University - Peking University Center for Life Sciences (CLS) http://tang.ucsf.edu/ http://cqb.pku.edu.cn/tanglab/ http://www.cls.edu.cn/PrincipalInvestigator/pi/index1578.shtml 6. Michael B. Elowitz , California Institute of Technology (CalTech) http://www.elowitz.caltech.edu/ 7. Albert-László Barabási , Northeastern University's Center for Complex Network Research (CCNR) the Center of Cancer Systems Biology (CCSB) at the Dana Farber Cancer Institute, Harvard University. http://www.barabasi.com/ 8. Marc Kirschner , the Department of Systems Biology at Harvard Medical School. http://kirschner.med.harvard.edu/ 9. James Collins , Biomedical Engineering at Boston University, Howard Hughes Medical Institute http://www.bu.edu/abl/index.html 10. Bernhard Ø. Palsson , University of California, San Diego (UCSD). http://systemsbiology.ucsd.edu/Home 11. Alexander van Oudenaarden , MIT. http://web.mit.edu/biophysics/ 12. Ruedi Aebersold , Eidgenössische Technische Hochschule Zürich (ETH Zurich). http://www.imsb.ethz.ch/researchgroup/rudolfa 13. Ernst Hafen , ETH. http://www.imsb.ethz.ch/researchgroup/hafene 14. Markus Stoffel , ETH. http://www.imsb.ethz.ch/researchgroup/stmarku 15. Uwe Sauer , ETH. http://www.imsb.ethz.ch/researchgroup/sauer 16. Xiaole (Shirley) Liu （刘小乐）, Harvard University http://liulab.dfci.harvard.edu/ 17. Martin Nowak , Harvard (哈佛大学数学系的，也是哈佛进化动力学中心的主任，一个搞理论的， 能在Nature和Science上发那么多文章，古今中外估计就他一个人能做到。 但我认为他的成果就对人类社会的影响而言， 不如Albert-László Barabási.) http://www.ped.fas.harvard.edu/people/faculty/ 18. Eran Segal , (Weizmann Institute of Science) http://genie.weizmann.ac.il/ 19. James J. Collins , Boston University http://www.bu.edu/abl/ 20. Peter Swain ， University of Edinburgh http://swainlab.bio.ed.ac.uk/ 21. Stanislas Leibler , Rockefeller University http://lab.rockefeller.edu/leibler/ 被誉为天才级的人物， Micheal Elowitz，Uri Alon，Peter Swain 这三个牛人都是他的学生。 22. Aviv Regev , Broad Institute of MIT and Harvard http://www.broadinstitute.org/history-leadership/leadership/scientific-leadership/core-members/aviv-regev 犹太 美女科学家。 23. Bing Ren(任兵) , UCSD http://bioinformatics-renlab.ucsd.edu/rentrac/ 24. Eduardo D. Sontag , Rutgers University http://www.math.rutgers.edu/~sontag/ 25. Michael Q. Zhang(张奇伟) , University of Texas at Dallas, Tsinghua University http://bioinfo.au.tsinghua.edu.cn/member/mzhang/ http://cb.utdallas.edu/zhanglab/index.htm 26. Badal Joshi , Postdoctoral Research Fellow School of Mathematics, Universityof Minnesot http://math.umn.edu/~joshi/ 27. Carsten Wiuf , Department of Mathematical Sciences, University of Copenhagen http://www.math.ku.dk/~pbx512/ 28. Arjan van der Schaft , University of Groningen http://www.math.rug.nl/~arjan/ 29. Peter J. Park , Harvard Medical School http://compbio.med.harvard.edu/index.html 30. Department of Systems Biology , Harvard Medical School. https://sysbio.med.harvard.edu/ 31. Computational and Systems Biology at MIT http://csbi.mit.edu/ 32. Computational Biology Group , Stanford Computer Science Department http://compbio.stanford.edu/index.html 33. Lior Pachter , Departments of Mathematics, Molecular Cell Biology and Electrical Engineering Computer Science; University of California, Berkeley http://math.berkeley.edu/~lpachter/ 34. Manolis Kellis (Kamvysselis), MIT http://web.mit.edu/manoli/ 35. Laboratory for Mathematical and Computational Biology , led by Lior Pachter at UC Berkeley http://bio.math.berkeley.edu/ 36. 北京大学 定量生物学中心 http://cqb.pku.edu.cn/ 37. 合成与系统生物学中心 ， 清华大学 信息科学与技术国家实验室 http://bioinfo.au.tsinghua.edu.cn/CSSB/web/ 38. Steven Salzberg's Center for Computational Biology ， at the Institute of Genetic Medicine at Johns Hopkins University http://ccb.jhu.edu/ 39. Barbara Wold's lab at Caltech http://woldlab.caltech.edu/ 40. Michael N. Hall , University of Basel http://www.biozentrum.unibas.ch/research/groups-platforms/overview/unit/hall/ 41. Peng Yin , Harvard Medical School. http://molecular-systems.net 42. Liaofu Luo( 罗辽复 ), Inner Mongolia University 我国理论生物物理学的开拓者之一。 43. Joseph DiStefano III , UCLA http://www.cs.ucla.edu/people/faculty/joseph-distefano-iii
标签: 研究机构
